Keith, A. R., J. K.  Bailey, M. K.  Lau, and T. G.  Whitham. 2017. Genetics-based interactions of foundation species affect community diversity, stability and network structure.. Proceedings of the Royal Society B Biological .. 284.

Bailey, J. K., J. A.  Schweitzer, B. M.  Fitzpatrick, M. A.  Genung, C. C.  Pregitzer, M.  Zinkgraf, T. G.  Whitham, A.  Keith, J. M.  Reilly-Wapstra, B. M.  Potts, B. J.  Rehill, C. J.  LeRoy, D. G.  Fischer, G. R.  Iason, M.  Dicke, and S. E.  Hartley. 2012. From genes to ecosystems: emerging concepts bridging ecological and evolutionary dynamics.. 269 - 286  (G. R.  Iason, Dicke, M., and Hartley, S. E., Eds.). Cambridge University PressNew York.

Lojewski, N. R., D. G.  Fischer, J. K.  Bailey, J. A.  Schweitzer, T. G.  Whitham, and S. C.  Hart. 2012. Genetic components to belowground carbon fluxes in a riparian forest ecosystem: a common garden approach.. The New phytologist 195:631 - 9.

Smith, D. S., J. A.  Schweitzer, P.  Turk, J. K.  Bailey, S. C.  Hart, S. M.  Shuster, and T. G.  Whitham. 2012. Soil-mediated local adaptation alters seedling survival and performance .. Plant and Soil 352:243 - 251.

Ferrier, S. M., R. K.  Bangert, E. I.  Hersch-Green, J. K.  Bailey, and G. J.  Allan. 2012. Unique arthropod communities on different host-plant genotypes results in greater arthropod diversity. Arthropod-Plant Interactions 6:187 - 195.

Smith, D. S., J. K.  Bailey, S. M.  Shuster, and T. G.  Whitham. 2011. A geographic mosaic of trophic interactions and selection: trees, aphids and birds. Journal of Evolutionary Biology 24:422 - 429.

Keith, A. R., J. K.  Bailey, and T. G.  Whitham. 2010. A genetic basis to community repeatability and stability.. Ecology 91:3398 - 406.

Bailey, J. K., J. A.  Schweitzer, F.  Ubeda, J.  Koricheva, C. J.  LeRoy, M. D.  Madritch, B. J.  Rehill, R. K.  Bangert, D. G.  Fischer, G. J.  Allan, and T. G.  Whitham. 2009. From genes to ecosystems: a synthesis of the effects of plant genetic factors across levels of organization.. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 364:1607 - 16.

Lojewski, N. R., D. G.  Fischer, J. K.  Bailey, J. A.  Schweitzer, T. G.  Whitham, and S. C.  Hart. 2009. Genetic basis of aboveground productivity in two native Populus species and their hybrids.. Tree physiology 29:1133 - 42.

Barbour, R. C., J. M.  O'Reilly-Wapstra, D. W.  De Little, G. J.  Jordan, D. A.  Steane, J. R.  Humphreys, J. K.  Bailey, T. G.  Whitham, and B. M.  Potts. 2009. A geographic mosaic of genetic variation within a foundation tree species and its community-level consequences.. Ecology 90:1762 - 72.

Whitham, T. G., S. P.  DiFazio, J. A.  Schweitzer, S. M.  Shuster, G. J.  Allan, J. K.  Bailey, and S. A.  Woolbright. 2008. Extending genomics to natural communities and ecosystems.. Science 320:492 - 5.

Schweitzer, J. A., M. D.  Madritch, J. K.  Bailey, C. J.  LeRoy, D. G.  Fischer, B. J.  Rehill, R. L.  Lindroth, A. E.  Hagerman, S. C.  Wooley, S. C.  Hart, and T. G.  Whitham. 2008. From genes to ecosystems: the genetic basis of condensed tannins and their role in nutrient regulation in a Populus model system .. Ecosystems 11:1005 - 1020.

Bangert, R. K., E. V.  Lonsdorf, G. M.  Wimp, S. M.  Shuster, D.  Fischer, J. A.  Schweitzer, G. J.  Allan, J. K.  Bailey, and T. G.  Whitham. 2008. Genetic structure of a foundation species: scaling community phenotypes from the individual to the region.. Heredity 100:121 - 31.

Schweitzer, J. A., J. K.  Bailey, D. G.  Fischer, C. J.  LeRoy, E. V.  Lonsdorf, T. G.  Whitham, and S. C.  Hart. 2008. Plant-soil microorganism interactions: heritable relationship between plant genotype and associated soil microorganisms.. Ecology 89:773 - 81.

Shuster, S. M., E. V.  Lonsdorf, G. M.  Wimp, J. K.  Bailey, and T. G.  Whitham. 2006. Community heritability measures the evolutionary consequences of indirect genetic effects on community structure.. Evolution; international journal of organic evolution 60:991 - 1003.

Rehill, B. J., T. G.  Whitham, G. D.  Martinsen, J. A.  Schweitzer, J. K.  Bailey, and R. L.  Lindroth. 2006. Developmental trajectories in cottonwood phytochemistry.. Journal of chemical ecology 32:2269 - 85.

Whitham, T. G., J. K.  Bailey, J. A.  Schweitzer, S. M.  Shuster, R. K.  Bangert, C. J.  LeRoy, E. V.  Lonsdorf, G. J.  Allan, S. P.  DiFazio, B. M.  Potts, D. G.  Fischer, C. A.  Gehring, R. L.  Lindroth, J. C.  Marks, S. C.  Hart, G. M.  Wimp, and S. C.  Wooley. 2006. A framework for community and ecosystem genetics: from genes to ecosystems.. Nature reviews. Genetics 7:510 - 23.

Bailey, J. K., S. C.  Wooley, R. L.  Lindroth, and T. G.  Whitham. 2006. Importance of species interactions to community heritability: a genetic basis to trophic-level interactions.. Ecology letters 9:78 - 85.