Publications and Presentations

Bailey, J. K., J. A. Schweitzer, B. M. Fitzpatrick, M. A. Genung, C. C. Pregitzer, M. Zinkgraf, T. G. Whitham, A. Keith, J. M. Reilly-Wapstra, B. M. Potts, B. J. Rehill, C. J. LeRoy, D. G. Fischer, G. R. Iason, M. Dicke, and S. E. Hartley. 2012. From genes to ecosystems: emerging concepts bridging ecological and evolutionary dynamics.. 269 - 286 (G. R. Iason, Dicke, M., and Hartley, S. E., Eds.). Cambridge University PressNew York.

Whitham, T. G., C. A. Gehring, H. M. Bothwell, H. F. Cooper, J. B. Hull, G. J. Allan, K. C. Grady, L. Markovchick, S. M. Shuster, J. Parker, A. E. Cadmus, D. H. Ikeda, and R. K. Bangert. 2017. IN PRESS: Using the Southwest Experimental Garden Array to enhance riparian restoration in response to global change: Identifying and deploying genotypes and populations for current and future environments. . in In Riparian research and management: Past, present, future. . Gen. Tech. Rep. RMRS-GTR-inpress Fort Collins U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station.Fort Collins, CO, USA.

Yamamoto, K., Y. He, P. L. Heinrich, A. Orange, B. Ruggeri, H. Wilberger, and P. G. Flikkema. 2010. WiSARDNet field-to-desktop: building a wireless cyberinfrastructure for environmental monitoring.. 101 - 108 in vanRiper C III, Wakeling, B. F., and Sisk, T. D. The Colorado Plateau IV: Shaping Conservation Through Science and Management. The University of Arizona PressTucson, AZ, USA.

Waring, K., S. Cushman, A. Eckert, L. Flores-Renteria, R. Sniezko, S. Still, C. Wehenkel, A. V. Whipple, M. Wing, E. Boes, E. Bucholz, J. Burnett, A. Castilla, J. DaBell, C. Friedline, C. Garms, E. Heck, J. Johnson, A. Leal-Saenz, B. McTeague, M. Menon, and E. Moler. 2017. Blending Ecology and Evolution using Emerging Technologies to Determine Species Distributions with a Non-native Pathogen in a Changing Climate.. in Forest Regeneration in Changing Climates. Corvallis, OR.

Waring, K., S. Cushman, A. Eckert, L. Flores-Renteria, R. Sniezko, S. Still, C. Wehenkel, A. V. Whipple, M. Wing, E. Boes, E. Bucholz, J. Burnett, A. Castilla, J. DaBell, C. Friedline, C. Garms, E. Heck, J. Johnson, A. Leal-Saenz, B. McTeague, M. Menon, and E. Moler. 2017. Blending Ecology and Evolution using Emerging Technologies to Determine Species Distributions with a Non-native Pathogen in a Changing Climate.. in Forest Regeneration in Changing Climates. Corvallis, OR.

Waring, K., S. Cushman, A. Eckert, L. Flores-Renteria, H. Lintz, R. Sniezko, C. Still, C. Wehenkel, A. V. Whipple, and M. Wing. 2016. Collaborative research for sustainable management of southwestern white pine.. 2 - 5 in Society of American Foresters National Convention. Madison, Wisconsin, USA.

Waring, K., S. Cushman, A. Eckert, L. Flores-Renteria, H. Lintz, R. Sniezko, C. Still, C. Wehenkel, A. V. Whipple, and M. Wing. 2016. Collaborative research for sustainable management of southwestern white pine.. 2 - 5 in Society of American Foresters National Convention. Madison, Wisconsin, USA.

Flikkema, P. G., P. K. Agarwal, J. S. Clark, C. Ellis, and A. Gelfand. 2007. From Data Reverence to Data Relevance: Model-Mediated Wireless Sensing of the Physical Environment. 988 - 994 in G. Albada, Dongarra, J., and Sloot, P. ICCS 2007, 7th International Conference. Springer Berlin/HeidelbergBeijing, China.

Waring, K., S. Cushman, A. Eckert, L. Flores-Renteria, R. Sniezko, C. Still, C. Wehenkel, A. V. Whipple, M. Wing, and P. Yury. 2017. A holistic approach to genetic conservation in Pinus strobiformis.. 17 - 21 in International Scientific Conference on Genetics of Populations Progress and Perspectives commemorating the 80th birthday of Academician Altukhov and dedicated to the 45th Anniversary of the Laboratory of Population Genetics named after Yu P Biological Sta. Zvenogorod Biological Station, Russia.

Waring, K., S. Cushman, A. Eckert, L. Flores-Renteria, R. Sniezko, C. Still, C. Wehenkel, A. V. Whipple, M. Wing, and P. Yury. 2017. A holistic approach to genetic conservation in Pinus strobiformis.. 17 - 21 in International Scientific Conference on Genetics of Populations Progress and Perspectives commemorating the 80th birthday of Academician Altukhov and dedicated to the 45th Anniversary of the Laboratory of Population Genetics named after Yu P Biological Sta. Zvenogorod Biological Station, Russia.

Flikkema, P. G., P. K. Agarwal, J. S. Clark, C. Ellis, and A. Gelfand. 2006. Model-Driven Dynamic Control of Embedded Wireless Sensor Networks. 409 - 416 in V. Alexandrov, van Albada, G., Sloot, P., and Dongarra, J. Computational Science - ICCS 2006, Lecture Notes in Computer Science, 6th International Conference. Springer Berlin/HeidelbergReading, UK.

Whitham, T. G. 2017. The reality of climate change and the need for genetics approaches in riparian, river and watershed restoration to maintain biodiversity in changing environments.. 22 - 27 in B. E. Ralston and Sarr, D. A.. U.S. Geological Survey Open-File Report 2017-1091.

Castilla, A. R., R. Sniezko, K. Waring, S. Cushman, A. J. Eckert, L. Flores, C. Still, C. Wehenkel, A. Whipple, M. Wing, T. E. Kolb, and B. A. Goodrich. 2016. Sustaining southwestern white pine by combining experimental work and genomic tools.

Castilla, A. R., R. Sniezko, K. Waring, S. Cushman, A. J. Eckert, L. Flores, C. Still, C. Wehenkel, A. Whipple, M. Wing, T. E. Kolb, and B. A. Goodrich. 2016. Sustaining southwestern white pine by combining experimental work and genomic tools.

Morrissey, E. M., R. L. Mau, E. Schwartz, J. G. Caporaso, P. Dijkstra, T. McHugh, J. C. Marks, L. B. Price, C. M. Liu, and B. A. Hungate. 2016. Taxon-specific microbial activities explain soil carbon cycling dynamics.. in Ecological Society of America. ESAFort Lauderdale, Florida, USA.

Dijkstra, P., R. L. Mau, T. A. McHugh, B. J. Koch, J. C. Marks, K. - J. van Groenigen, X. - J. Liu, E. Schwartz, E. M. Morrissey, and B. A. Hungate. 2016. Taxon-Specific Responses To Whole System Carbon Cycling In The Root Microbiome.. in Phytobiomes from microbes to plant ecosystems. Santa Fe, New Mexicao, USA.

Knapp, J., M. Elo, J. Schaffer, and P. G. Flikkema. 2014. Towards Intelligent Closed-Loop Workflows for Ecological Research Dynamic Data-driven Environmental Systems. in Dynamic Data-driven Environmental Systems Science Conference (DyDESS). DyDESSCambridge, MA, USA.

Hagerty, S. B., K. J. van Groenigen, E. Schwartz, B. A. Hungate, G. W. Koch, and P. Dijkstra. 2015. Influence of varying nitrogen availability on soil microbial growth efficiency.. ESABaltimore, MD, USA.

Barak, R. S., J. B. Fant, A. T. Kramer, and K. A. Skogen. 2015. Assessing the value of potential “native winners” for restoration of cheatgrass-invaded habitat.. Western North American Naturalist 75:58 - 69.

Butterfield, B. J., A. L. Camhi, R. L. Rubin, and C. R. Schwalm. 2016. Chapter Five – Tradeoffs and Compatibilities Among Ecosystem Services : Biological, Physical and Economic Drivers of Multifunctionality. Advances in Ecological Research 54:207 - 243.

Gehring, C. A., M. Hayer, L. Flores-Renteria, A. L. Krohn, E. Schwartz, and P. Dijkstra. 2016. Cheatgrass invasion alters the abundance and composition of dark septate fungal communities in sagebrush steppe.. Botany 9:481 - 491.

Hultine, K. R., K. C. Grady, T. E. Wood, S. M. Shuster, J. C. Stella, and T. G. Whitham. 2016. Climate change perils for dioecious plant species.. Nature Plant 16109 109.

Hultine, K. R., K. C. Grady, T. E. Wood, S. M. Shuster, J. C. Stella, and T. G. Whitham. 2016. Climate change perils for dioecious plant species.. Nature Plant 16109 109.

Shuster, S. M., E. V. Lonsdorf, G. M. Wimp, J. K. Bailey, and T. G. Whitham. 2006. Community heritability measures the evolutionary consequences of indirect genetic effects on community structure.. Evolution; international journal of organic evolution 60:991 - 1003.

Whitham, T. G., C. A. Gehring, L. J. Lamit, T. Wojtowicz, L. M. Evans, A. R. Keith, and D. Solance Smith. 2012. Community specificity: life and afterlife effects of genes.. Trends in plant science 17:271 - 81.

Rehill, B. J., T. G. Whitham, G. D. Martinsen, J. A. Schweitzer, J. K. Bailey, and R. L. Lindroth. 2006. Developmental trajectories in cottonwood phytochemistry.. Journal of chemical ecology 32:2269 - 85.

Morrissey, E. M., T. A. McHugh, L. Preteska, M. Hayer, P. Dijkstra, B. A. Hungate, and E. Schwartz. 2015. Dynamics of extracellular DNA decomposition and bacterial community composition in soil.. Soil Biology and Biochemistry 86:42 - 49.

Whitham, T. G., S. P. DiFazio, J. A. Schweitzer, S. M. Shuster, G. J. Allan, J. K. Bailey, and S. A. Woolbright. 2008. Extending genomics to natural communities and ecosystems.. Science 320:492 - 5.

Whitham, T. G., S. P. DiFazio, J. A. Schweitzer, S. M. Shuster, G. J. Allan, J. K. Bailey, and S. A. Woolbright. 2008. Extending genomics to natural communities and ecosystems.. Science 320:492 - 5.

Whitham, T. G., J. K. Bailey, J. A. Schweitzer, S. M. Shuster, R. K. Bangert, C. J. LeRoy, E. V. Lonsdorf, G. J. Allan, S. P. DiFazio, B. M. Potts, D. G. Fischer, C. A. Gehring, R. L. Lindroth, J. C. Marks, S. C. Hart, G. M. Wimp, and S. C. Wooley. 2006. A framework for community and ecosystem genetics: from genes to ecosystems.. Nature reviews. Genetics 7:510 - 23.